U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

FLA18 FASCICLIN-like arabinogalactan protein 18 precursor [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820342, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
FLA18
Official Full Name
FASCICLIN-like arabinogalactan protein 18 precursor
Primary source
TAIR:AT3G11700
Locus tag
AT3G11700
See related
Araport:AT3G11700
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
FASCICLIN-like arabinogalactan protein 18 precursor
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See FLA18 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (3698658..3701514)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene aluminum activated malate transporter family protein Neighboring gene uncharacterized protein Neighboring gene lysyl-tRNA synthetase 1 Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
  2. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

NM_112002.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in plant-type vacuole HDA PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  
located_in secretory vesicle HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
FASCICLIN-like arabinogalactan protein 18 precursor
NP_566398.1
  • FASCICLIN-like arabinogalactan protein 18 precursor (FLA18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cyclopentenone, cell adhesion; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 17 precursor (TAIR:AT5G06390.1); Has 488 Blast hits to 470 proteins in 128 species: Archae - 2; Bacteria - 195; Metazoa - 32; Fungi - 4; Plants - 192; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3698658..3701514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112002.3 → NP_566398.1  FASCICLIN-like arabinogalactan protein 18 precursor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566398.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q93W32, Q9SRM7
    UniProtKB/TrEMBL
    A0A178VEM3, A0A5S9XCJ8, A0A7G2EL19
    Conserved Domains (2) summary
    smart00554
    Location:312 → 416
    FAS1; Four repeated domains in the Fasciclin I family of proteins, present in many other contexts
    pfam02469
    Location:51 → 187
    Fasciclin; Fasciclin domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q93W32.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools