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Protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820572, updated on 18-Sep-2024

Summary

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Official Full Name
Protein kinase family protein
Primary source
TAIR:AT3G13670
Locus tag
AT3G13670
See related
Araport:AT3G13670
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
16
Sequence:
Chromosome: 3; NC_003074.8 (4469153..4473547)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Disease resistance-responsive (dirigent-like protein) family protein Neighboring gene Disease resistance-responsive (dirigent-like protein) family protein Neighboring gene TRAF-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene F-box and associated interaction domains-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phosphorylation of Histone H2A at Serine 95: A Plant-Specific Mark Involved in Flowering Time Regulation and H2A.Z Deposition. Su Y, et al. Plant Cell, 2017 Sep. PMID 28790150, Free PMC Article
  2. Molecular basis for blue light-dependent phosphorylation of Arabidopsis cryptochrome 2. Liu Q, et al. Nat Commun, 2017 May 11. PMID 28492234, Free PMC Article
  3. Identification of Evening Complex Associated Proteins in Arabidopsis by Affinity Purification and Mass Spectrometry. Huang H, et al. Mol Cell Proteomics, 2016 Jan. PMID 26545401, Free PMC Article
  4. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
  5. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_112214.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables histone kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein serine/threonine kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within long-day photoperiodism, flowering IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in post-translational protein modification IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Protein kinase family protein
NP_187977.1
  • Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT2G25760.1); Has 17131 Blast hits to 17075 proteins in 1486 species: Archae - 12; Bacteria - 5943; Metazoa - 4767; Fungi - 1425; Plants - 2358; Viruses - 214; Other Eukaryotes - 2412 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4469153..4473547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112214.5 → NP_187977.1  Protein kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187977.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VCR8, A0A384LQ27, A0A7G2EPX0, Q9LID3
    Conserved Domains (1) summary
    cd14016
    Location:137 → 412
    STKc_CK1; Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1
Nucleotide Protein
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