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EXO70D3 exocyst subunit exo70 family protein D3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820625, updated on 18-Sep-2024

Summary

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Official Symbol
EXO70D3
Official Full Name
exocyst subunit exo70 family protein D3
Primary source
TAIR:AT3G14090
Locus tag
AT3G14090
See related
Araport:AT3G14090
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATEXO70D3; exocyst subunit exo70 family protein D3; MAG2.5
Summary
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
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Genomic context

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See EXO70D3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (4669197..4671796, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene ncRNA Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EXO70D isoforms mediate selective autophagic degradation of type-A ARR proteins to regulate cytokinin sensitivity. Acheampong AK, et al. Proc Natl Acad Sci U S A, 2020 Oct 27. PMID 33051300, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. EXO70D isoforms mediate selective autophagic degradation of type-A ARR proteins to regulate cytokinin sensitivity.
    Title: EXO70D isoforms mediate selective autophagic degradation of type-A ARR proteins to regulate cytokinin sensitivity.
Submit: New GeneRIF Correction

General gene information

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NM_112265.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphatidylinositol-4,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of exocyst IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
exocyst subunit exo70 family protein D3
NP_566477.2
  • exocyst subunit exo70 family protein D3 (EXO70D3); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein D2 (TAIR:AT1G54090.1); Has 911 Blast hits to 902 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 98; Plants - 650; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4669197..4671796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112265.5 → NP_566477.2  exocyst subunit exo70 family protein D3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566477.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V7V7, A0A384KCC1, A0A5S9XCH6, Q9LJH9
    Conserved Domains (1) summary
    pfam03081
    Location:242 → 609
    Exo70; Exo70 exocyst complex subunit
Nucleotide Protein
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