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Transcription factor TFIIIC, tau55-related protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820781, updated on 18-Sep-2024

Summary

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Official Full Name
Transcription factor TFIIIC, tau55-related protein
Primary source
TAIR:AT3G15420
Locus tag
AT3G15420
See related
Araport:AT3G15420
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Sequence:
Chromosome: 3; NC_003074.8 (5207575..5208509, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene anther 20 Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene Regulator of chromosome condensation (RCC1) family protein Neighboring gene RING/U-box protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_112410.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in transcription by RNA polymerase III IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Transcription factor TFIIIC, tau55-related protein
NP_188161.1
  • Transcription factor TFIIIC, tau55-related protein; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIIC, tau55-related (InterPro:IPR019481); BEST Arabidopsis thaliana protein match is: Transcription factor TFIIIC, tau55-related protein (TAIR:AT1G80745.1); Has 31 Blast hits to 31 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    5207575..5208509 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112410.3 → NP_188161.1  Transcription factor TFIIIC, tau55-related protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188161.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VHK3, A0A384LJ68, A0A5S9XCJ4, A0A654FH72, Q9LDR3
    Conserved Domains (1) summary
    pfam10419
    Location:2 → 95
    TFIIIC_sub6; TFIIIC subunit
Nucleotide Protein
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