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Pollen Ole e 1 allergen and extensin family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820918, updated on 18-Sep-2024

Summary

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Official Full Name
Pollen Ole e 1 allergen and extensin family protein
Primary source
TAIR:AT3G16660
Locus tag
AT3G16660
See related
Araport:AT3G16660
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (5676749..5678099)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene translationally controlled tumor protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Pollen Ole e 1 allergen and extensin family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_112539.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Pollen Ole e 1 allergen and extensin family protein
NP_188288.2
  • Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT3G16670.1); Has 273 Blast hits to 210 proteins in 63 species: Archae - 0; Bacteria - 149; Metazoa - 42; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    5676749..5678099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001338248.1 → NP_001326202.1  Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9LUR8

  2. NM_112539.4 → NP_188288.2  Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188288.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V858, A0A384LLD4, A0A7G2EQT8, Q8GYY6
    Conserved Domains (1) summary
    pfam01190
    Location:65 → 142
    Pollen_Ole_e_I; Pollen proteins Ole e I like
Nucleotide Protein
Heading Accession and Version

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