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Galactose mutarotase-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821108, updated on 18-Sep-2024

Summary

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Official Full Name
Galactose mutarotase-like superfamily protein
Primary source
TAIR:AT3G01590
Locus tag
AT3G01590
See related
Araport:AT3G01590
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F4P13.13; F4P13_13
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Genomic context

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Location:
chromosome: 3
Exon count:
10
Sequence:
Chromosome: 3; NC_003074.8 (225855..228628)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene NAC domain containing protein 44 Neighboring gene cell division cycle 48C Neighboring gene beta-1,4-N-acetylglucosaminyltransferase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_111025.4
NM_180162.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glucose-6-phosphate 1-epimerase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Galactose mutarotase-like superfamily protein
NP_566143.1
  • Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: aldose 1-epimerase family protein (TAIR:AT5G14500.1); Has 1892 Blast hits to 1891 proteins in 757 species: Archae - 0; Bacteria - 1255; Metazoa - 39; Fungi - 135; Plants - 251; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).
NP_850493.1
  • Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: aldose 1-epimerase family protein (TAIR:AT5G14500.1); Has 1892 Blast hits to 1891 proteins in 757 species: Archae - 0; Bacteria - 1255; Metazoa - 39; Fungi - 135; Plants - 251; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    225855..228628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111025.4 → NP_566143.1  Galactose mutarotase-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566143.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VHG2, A0A384KDP9, Q944A5, Q9SS96
    Conserved Domains (1) summary
    cd09020
    Location:14 → 285
    D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like

  2. NM_180162.1 → NP_850493.1  Galactose mutarotase-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850493.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VHG2, A0A384KDP9, Q944A5, Q9SS96
    Conserved Domains (1) summary
    cd09020
    Location:14 → 285
    D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like
Nucleotide Protein
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