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SYP131 syntaxin of plants 131 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821141, updated on 18-Sep-2024

Summary

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Official Symbol
SYP131
Official Full Name
syntaxin of plants 131
Primary source
TAIR:AT3G03800
Locus tag
AT3G03800
See related
Araport:AT3G03800
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATSYP131; F20H23.28; F20H23_28; syntaxin of plants 131
Summary
member of SYP13 Gene Family
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Genomic context

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See SYP131 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Sequence:
Chromosome: 3; NC_003074.8 (969050..971691)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene methionine synthase 2 Neighboring gene ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein Neighboring gene O-fucosyltransferase family protein Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. VAMP726 and VAMP725 regulate vesicle secretion and pollen tube growth in Arabidopsis. Liu X, et al. Plant Cell Rep, 2023 Dec. PMID 37805949
  2. Evolutionarily diverse SYP1 Qa-SNAREs jointly sustain pollen tube growth in Arabidopsis. Slane D, et al. Plant J, 2017 Nov. PMID 28792633
  3. The Arabidopsis genome. An abundance of soluble N-ethylmaleimide-sensitive factor adaptor protein receptors. Sanderfoot AA, et al. Plant Physiol, 2000 Dec. PMID 11115874, Free PMC Article
  4. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812
  5. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

NM_001337487.1
NM_001337488.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
  
enables SNAP receptor activity TAS
Traceable Author Statement
more info
 PubMed 
enables SNARE binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within intracellular protein transport TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within membrane fusion TAS
Traceable Author Statement
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in apical plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane HDA PubMed 
located_in pollen tube tip IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
syntaxin of plants 131
NP_001319461.1
  • syntaxin of plants 131 (SYP131); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 132 (TAIR:AT5G08080.1); Has 2798 Blast hits to 2798 proteins in 353 species: Archae - 4; Bacteria - 78; Metazoa - 1293; Fungi - 501; Plants - 492; Viruses - 0; Other Eukaryotes - 430 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    969050..971691
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001337487.1 → NP_001319461.1  syntaxin of plants 131 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SRV7
    UniProtKB/TrEMBL
    A0A178V6V2, A0A1I9LQP3, A0A5S9X8V5, A0A654F3U4
    Conserved Domains (2) summary
    pfam00804
    Location:35 → 240
    Syntaxin
    cl22856
    Location:208 → 274
    SNARE; SNARE motif

  2. NM_001337488.1 → NP_001326903.1  syntaxin of plants 131 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SRV7
    UniProtKB/TrEMBL
    A0A178V6V2, A0A1I9LQP3, A0A5S9X8V5, A0A654F3U4
    Conserved Domains (2) summary
    pfam00804
    Location:35 → 240
    Syntaxin
    cl22856
    Location:208 → 274
    SNARE; SNARE motif
Nucleotide Protein
Heading Accession and Version

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