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small acidic-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821238, updated on 18-Sep-2024

Summary

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Official Full Name
small acidic-like protein
Primary source
TAIR:AT3G02220
Locus tag
AT3G02220
See related
Araport:AT3G02220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14P3.13; F14P3_13
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Genomic context

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Location:
chromosome: 3
Exon count:
7
Sequence:
Chromosome: 3; NC_003074.8 (412041..413742, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L39 family protein Neighboring gene Proteasome component (PCI) domain protein Neighboring gene COBRA-like protein 1 precursor Neighboring gene reversibly glycosylated polypeptide 1 Neighboring gene root meristem growth factor-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_111089.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
small acidic-like protein
NP_186871.1
  • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2039 (InterPro:IPR019351); Has 215 Blast hits to 215 proteins in 94 species: Archae - 2; Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    412041..413742 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111089.4 → NP_186871.1  small acidic-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_186871.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VB99, A0A5S9X8D0, Q9SRT8
    Conserved Domains (1) summary
    pfam10217
    Location:9 → 100
    DUF2039; Uncharacterized conserved protein (DUF2039)
Nucleotide Protein
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