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LPP4 Phosphatidic acid phosphatase (PAP2) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821350, updated on 18-Sep-2024

Summary

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Official Symbol
LPP4
Official Full Name
Phosphatidic acid phosphatase (PAP2) family protein
Primary source
TAIR:AT3G18220
Locus tag
AT3G18220
See related
Araport:AT3G18220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
lipid phosphate phosphatase 4
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Genomic context

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See LPP4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Sequence:
Chromosome: 3; NC_003074.8 (6247900..6250007)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Octicosapeptide/Phox/Bem1p family protein Neighboring gene uncharacterized protein Neighboring gene Ribosomal protein S24/S35

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_112706.3

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Phosphatidic acid phosphatase (PAP2) family protein
NP_566602.1
  • Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity, phosphatidate phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 2 (TAIR:AT1G15080.1); Has 2090 Blast hits to 2085 proteins in 382 species: Archae - 5; Bacteria - 336; Metazoa - 902; Fungi - 401; Plants - 197; Viruses - 3; Other Eukaryotes - 246 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    6247900..6250007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112706.3 → NP_566602.1  Phosphatidic acid phosphatase (PAP2) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566602.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WNG6, Q8LAS9, Q9LJQ8
    UniProtKB/TrEMBL
    A0A5S9XDE8, A0A654F8C9
    Conserved Domains (2) summary
    COG0671
    Location:23 → 246
    PgpB; Membrane-associated phospholipid phosphatase [Lipid transport and metabolism]
    cd03390
    Location:55 → 244
    PAP2_containing_1_like; PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0WNG6.1

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