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tnpA transposon Tn4555 protein TnpA [ Phocaeicola sartorii ]

Gene ID: 82152661, updated on 11-Dec-2024

Summary

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Gene symbol
tnpA
Gene description
transposon Tn4555 protein TnpA
Locus tag
HUT37_RS05985
Gene type
protein coding
Organism
Phocaeicola sartorii (strain: CBBP-3, nat-host: mouse)
Lineage
Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola
Old locus tag
HUT37_05990
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Genomic context

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NZ_JABVZU0100000.1Genomic Context describing neighboring genes Neighboring gene tyrosine-type recombinase/integrase Neighboring gene transposon Tn4555 protein TnpC Neighboring gene hypothetical protein Neighboring gene condensin complex protein MksE Neighboring gene ATP-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_JABVZU010000003.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic structure and transcriptional analysis of a mobilizable, antibiotic resistance transposon from Bacteroides. Tribble GD, et al. Plasmid, 1999 Jul. PMID 10413660
  2. The Bacteroides mobilizable transposon Tn4555 integrates by a site-specific recombination mechanism similar to that of the gram-positive bacterial element Tn916. Tribble GD, et al. J Bacteriol, 1997 Apr. PMID 9098073, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
transposon Tn4555 protein TnpA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_JABVZU010000003.1 Reference assembly

    Range
    14058..14993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_004292844.1 MULTISPECIES: transposon Tn4555 protein TnpA [Bacteria]

    See identical proteins and their annotated locations for WP_004292844.1

    UniProtKB/TrEMBL
    A0A078QTI2, A0A095Y9X1, A0A095ZGG1, A0A096AAB6, A0A096AYH6, A0A096BUW6, A0A099BY00, A0A174SVN2, A0A174WZ62, A0A223HQN2, A0A246ERV0, A0A250KK26, A0A2K0XPE3, A0A2N6QP44, A0A373FU97, A0A373ZJ00, A0A374N2L0, A0A374TCY4, A0A3A5QTV1, A0A3A5SCS1, A0A3A5SL03, A0A3A6K7X2, A0A3D9A3Y3, A0A3E4N2G5, A0A3E4QJM4, A0A3E4VXF3, A0A3E4ZME2, A0A3S0RAG1, A0A412YPJ2, A0A413GBF2, A0A413ZPL3, A0A414M264, A0A415NDF6, A0A416GDG8, A0A4Y8V8L5, A0A5M5N4X3, A0A7C9LDW3, A0A8E1QYU1, A0A926IPK8, A0A930IKN7, A0AA46UCN5, A0AAD2TLG7, A0AAW6FJW2, A0AAX2F3X8, C3QZ33, D1VZX8, D1W3X2, D4VAE3, E1KQX9, E5V6U6, E5WUN7, F0H5X3, F7M2C2, F9DJM4, H1HIP2, I4Z9Q3, I9QDD5, O05722, U2LD23, U6RAR8
    Conserved Domains (2) summary
    pfam12728
    Location:58 → 108
    HTH_17; Helix-turn-helix domain
    cl02600
    Location:209 → 269
    HTH_MerR-SF; Helix-Turn-Helix DNA binding domain of transcription regulators from the MerR superfamily