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Protein kinase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821599, updated on 18-Sep-2024

Summary

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Official Full Name
Protein kinase superfamily protein
Primary source
TAIR:AT3G20530
Locus tag
AT3G20530
See related
Araport:AT3G20530
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Sequence:
Chromosome: 3; NC_003074.8 (7166027..7168060)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Transmembrane proteins 14C Neighboring gene SHV3-like 3 Neighboring gene polymerase gamma 1 Neighboring gene miscRNA Neighboring gene SMAD/FHA domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. PPero, a Computational Model for Plant PTS1 Type Peroxisomal Protein Prediction. Wang J, et al. PLoS One, 2017. PMID 28045983, Free PMC Article
  2. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001338485.1
NM_112945.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in peroxisome IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Protein kinase superfamily protein
NP_188689.1
  • Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18610.2); Has 115048 Blast hits to 113699 proteins in 4223 species: Archae - 109; Bacteria - 13576; Metazoa - 42161; Fungi - 9618; Plants - 32810; Viruses - 348; Other Eukaryotes - 16426 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    7166027..7168060
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112945.4 → NP_188689.1  Protein kinase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188689.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JEQ2, Q84WF3, Q9LJU5
    UniProtKB/TrEMBL
    A0A178VDC4, A0A5S9XEJ5, A0A654F927
    Conserved Domains (1) summary
    cd14066
    Location:88 → 358
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

  2. NM_001338485.1 → NP_001327572.1  Protein kinase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LSQ7
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4JEQ2.1

Gene LinkOut

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