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DMP1 transmembrane protein, putative (DUF679 domain membrane protein 1) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821706, updated on 18-Sep-2024

Summary

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Official Symbol
DMP1
Official Full Name
transmembrane protein, putative (DUF679 domain membrane protein 1)
Primary source
TAIR:AT3G21520
Locus tag
AT3G21520
See related
Araport:AT3G21520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
Arabidopsis thaliana DUF679 domain membrane protein 1; AtDMP1; DUF679 domain membrane protein 1
Summary
Encodes a protein is directly or indirectly involved in membrane fission during breakdown of the ER and the tonoplast during leaf senescence and in membrane fusion during vacuole biogenesis in roots.
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Genomic context

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See DMP1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (7581959..7582793)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene 1-deoxy-D-xylulose 5-phosphate synthase 1 Neighboring gene histidine-containing phosphotransmitter 1 Neighboring gene ncRNA Neighboring gene DNAse I-like superfamily protein Neighboring gene transducin family protein / WD-40 repeat family protein Neighboring gene transmembrane protein, putative (DUF679 domain membrane protein 2)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis senescence-associated protein DMP1 is involved in membrane remodeling of the ER and tonoplast. Kasaras A, et al. BMC Plant Biol, 2012 Apr 24. PMID 22530652, Free PMC Article
  2. Expression, localisation and phylogeny of a novel family of plant-specific membrane proteins. Kasaras A, et al. Plant Biol (Stuttg), 2010 Sep. PMID 20712629
  3. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_113047.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within endomembrane system organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in endoplasmic reticulum membrane organization IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in membrane fission IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in membrane fusion IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in plant organ senescence IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plant-type vacuole membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein, putative (DUF679 domain membrane protein 1)
NP_188789.2
  • DUF679 domain membrane protein 1 (DMP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF679 (InterPro:IPR007770); BEST Arabidopsis thaliana protein match is: DUF679 domain membrane protein 2 (TAIR:AT3G21550.1); Has 263 Blast hits to 255 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    7581959..7582793
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113047.3 → NP_188789.2  transmembrane protein, putative (DUF679 domain membrane protein 1) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188789.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LVF4
    UniProtKB/TrEMBL
    A0A178VK65, A0A5S9XEV4, A0A654F9D7
    Conserved Domains (1) summary
    pfam05078
    Location:28 → 187
    DUF679; Protein of unknown function (DUF679)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LVF4.1

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