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RLP38 receptor like protein 38 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821887, updated on 18-Sep-2024

Summary

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Official Symbol
RLP38
Official Full Name
receptor like protein 38
Primary source
TAIR:AT3G23120
Locus tag
AT3G23120
See related
Araport:AT3G23120
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtRLP38; receptor like protein 38
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Genomic context

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See RLP38 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (8227222..8229619, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene DNA ligase IV-binding protein Neighboring gene receptor like protein 37 Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_113213.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within signal transduction IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
receptor like protein 38
NP_188953.1
  • receptor like protein 38 (RLP38); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 37 (TAIR:AT3G23110.1); Has 120242 Blast hits to 33265 proteins in 1172 species: Archae - 42; Bacteria - 8485; Metazoa - 29672; Fungi - 1389; Plants - 71311; Viruses - 22; Other Eukaryotes - 9321 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    8227222..8229619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113213.2 → NP_188953.1  receptor like protein 38 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188953.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LS79
    UniProtKB/TrEMBL
    A0A178VNB3
    Conserved Domains (2) summary
    sd00033
    Location:112 → 135
    LRR_RI; leucine-rich repeat [structural motif]
    cl26793
    Location:11 → 721
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LS79.1

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