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S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821910, updated on 18-Sep-2024

Summary

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Official Full Name
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Primary source
TAIR:AT3G23300
Locus tag
AT3G23300
See related
Araport:AT3G23300
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
9
Sequence:
Chromosome: 3; NC_003074.8 (8332797..8336235)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) Neighboring gene AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein Neighboring gene Polynucleotidyl transferase, ribonuclease H-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Label-free protein quantification for plant Golgi protein localization and abundance. Nikolovski N, et al. Plant Physiol, 2014 Oct. PMID 25122472, Free PMC Article
  2. Analysis of the Arabidopsis nuclear proteome and its response to cold stress. Bae MS, et al. Plant J, 2003 Dec. PMID 14617066
  3. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article
  4. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article
  5. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001338623.1
NM_113232.5

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in Golgi medial cisterna HDA PubMed 
located_in endosome HDA PubMed 
located_in nucleus HDA PubMed 
located_in plant-type vacuole HDA PubMed 
located_in trans-Golgi network HDA PubMed 

General protein information

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Preferred Names
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NP_566725.2
  • S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G14360.2); Has 1180 Blast hits to 1159 proteins in 67 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 1092; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    8332797..8336235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113232.5 → NP_566725.2  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566725.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8H118, Q93VT5, Q9LW67
    UniProtKB/TrEMBL
    A0A178VBP4, A0A5S9XF54, A0A654F9Y1
    Conserved Domains (1) summary
    pfam03141
    Location:88 → 598
    Methyltransf_29; Putative S-adenosyl-L-methionine-dependent methyltransferase

  2. NM_001338623.1 → NP_001327090.1  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8H118, Q93VT5, Q9LW67
    UniProtKB/TrEMBL
    A0A178VBP4, A0A5S9XF54, A0A654F9Y1
    Conserved Domains (1) summary
    pfam03141
    Location:88 → 598
    Methyltransf_29; Putative S-adenosyl-L-methionine-dependent methyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8H118.2

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