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ENTH/VHS family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822316, updated on 18-Sep-2024

Summary

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Official Full Name
ENTH/VHS family protein
Primary source
TAIR:AT3G26990
Locus tag
AT3G26990
See related
Araport:AT3G26990
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
8
Sequence:
Chromosome: 3; NC_003074.8 (9948125..9952055, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Pollen Ole e 1 allergen and extensin family protein Neighboring gene ncRNA Neighboring gene membrane-anchored ubiquitin-fold protein 4 precursor Neighboring gene actin related protein 2 Neighboring gene TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001338847.1
NM_113613.5

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ENTH/VHS family protein
NP_189335.2
  • ENTH/VHS family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT5G65180.1); Has 1003 Blast hits to 995 proteins in 197 species: Archae - 0; Bacteria - 21; Metazoa - 515; Fungi - 219; Plants - 159; Viruses - 1; Other Eukaryotes - 88 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    9948125..9952055 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113613.5 → NP_189335.2  ENTH/VHS family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189335.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XG06, Q66GK1
    Conserved Domains (1) summary
    smart00582
    Location:10 → 130
    RPR; domain present in proteins, which are involved in regulation of nuclear pre-mRNA

  2. NM_001338847.1 → NP_001325949.1  ENTH/VHS family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XG06, Q66GK1
Nucleotide Protein
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