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Outer membrane OMP85 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824022, updated on 18-Sep-2024

Summary

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Official Full Name
Outer membrane OMP85 family protein
Primary source
TAIR:AT3G48620
Locus tag
AT3G48620
See related
Araport:AT3G48620
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
8
Sequence:
Chromosome: 3; NC_003074.8 (18015983..18017821)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene SWIB complex BAF60b domain-containing protein Neighboring gene non-specific phospholipase C6 Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Outer membrane OMP85 family protein
NP_190431.5
  • Outer membrane OMP85 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: outer membrane; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT3G44160.1); Has 503 Blast hits to 503 proteins in 137 species: Archae - 0; Bacteria - 247; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    18015983..18017821
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114721.6 → NP_190431.5  Outer membrane OMP85 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190431.5

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JF35, Q9SMN7
    UniProtKB/TrEMBL
    A0A654FDJ7
    Conserved Domains (1) summary
    TIGR00992
    Location:90 → 300
    3a0901s03IAP75; chloroplast envelope protein translocase, IAP75 family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4JF35.1

Gene LinkOut

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