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GATL2 galacturonosyltransferase-like 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824240, updated on 18-Sep-2024

Summary

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Official Symbol
GATL2
Official Full Name
galacturonosyltransferase-like 2
Primary source
TAIR:AT3G50760
Locus tag
AT3G50760
See related
Araport:AT3G50760
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F18B3.40; galacturonosyltransferase-like 2
Summary
Encodes a protein with putative galacturonosyltransferase activity.
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Genomic context

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See GATL2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (18867834..18869399)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene calmodulin-like 41 Neighboring gene BTB/POZ domain protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular analysis of a family of Arabidopsis genes related to galacturonosyltransferases. Kong Y, et al. Plant Physiol, 2011 Apr. PMID 21300919, Free PMC Article
  2. Functional identification of an Arabidopsis pectin biosynthetic homogalacturonan galacturonosyltransferase. Sterling JD, et al. Proc Natl Acad Sci U S A, 2006 Mar 28. PMID 16540543, Free PMC Article
  3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_114936.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables polygalacturonate 4-alpha-galacturonosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in pectin biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
galacturonosyltransferase-like 2
NP_190645.3
  • galacturonosyltransferase-like 2 (GATL2); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G19300.1); Has 1885 Blast hits to 1878 proteins in 434 species: Archae - 2; Bacteria - 935; Metazoa - 151; Fungi - 0; Plants - 716; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    18867834..18869399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114936.5 → NP_190645.3  galacturonosyltransferase-like 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190645.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9S7G2
    UniProtKB/TrEMBL
    A0A178V5S7, A0A384LMH5, A0A5S9XJN0, W8QNK5
    Conserved Domains (1) summary
    pfam01501
    Location:54 → 311
    Glyco_transf_8; Glycosyl transferase family 8
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9S7G2.1

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