U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Thioredoxin superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824488, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Thioredoxin superfamily protein
Primary source
TAIR:AT3G53220
Locus tag
AT3G53220
See related
Araport:AT3G53220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (19721937..19722846)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene myb domain protein 27 Neighboring gene nodulin MtN21 /EamA-like transporter family protein Neighboring gene ATPase, AAA-type, CDC48 protein Neighboring gene ROTUNDIFOLIA like 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

NM_115182.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Thioredoxin superfamily protein
NP_566982.1
  • Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin 2 (TAIR:AT5G39950.1); Has 8343 Blast hits to 8341 proteins in 2235 species: Archae - 86; Bacteria - 4305; Metazoa - 749; Fungi - 428; Plants - 986; Viruses - 2; Other Eukaryotes - 1787 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    19721937..19722846
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115182.2 → NP_566982.1  Thioredoxin superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566982.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LCH9, Q9SCN9
    UniProtKB/TrEMBL
    A0A5S9XKE0, A0A654FFE2
    Conserved Domains (1) summary
    cd02947
    Location:36 → 113
    TRX_family; TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8LCH9.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools