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BSK6 kinase with tetratricopeptide repeat domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824570, updated on 18-Sep-2024

Summary

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Official Symbol
BSK6
Official Full Name
kinase with tetratricopeptide repeat domain-containing protein
Primary source
TAIR:AT3G54030
Locus tag
AT3G54030
See related
Araport:AT3G54030
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
brassinosteroid-signaling kinase 6
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Genomic context

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See BSK6 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Sequence:
Chromosome: 3; NC_003074.8 (20010927..20013766)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene FKBP-type peptidyl-prolyl cis-trans isomerase family protein Neighboring gene Inositol phosphorylceramide synthase 1 Neighboring gene PAR1 protein Neighboring gene high cyclic electron flow 1 Neighboring gene myosin-M heavy protein Neighboring gene LOW protein: ankyrin repeat protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Shade-induced RTFL/DVL peptides negatively regulate the shade response by directly interacting with BSKs in Arabidopsis. Huang S, et al. Nat Commun, 2023 Oct 28. PMID 37898648, Free PMC Article
  2. BSKs are partially redundant positive regulators of brassinosteroid signaling in Arabidopsis. Sreeramulu S, et al. Plant J, 2013 Jun. PMID 23496207
  3. Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Nühse TS, et al. Mol Cell Proteomics, 2003 Nov. PMID 14506206
  4. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812
  5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_115263.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in brassinosteroid mediated signaling pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane HDA PubMed 

General protein information

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Preferred Names
kinase with tetratricopeptide repeat domain-containing protein
NP_190971.1
  • Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G59010.1); Has 33259 Blast hits to 32742 proteins in 1298 species: Archae - 16; Bacteria - 2417; Metazoa - 7041; Fungi - 251; Plants - 21929; Viruses - 104; Other Eukaryotes - 1501 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    20010927..20013766
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115263.4 → NP_190971.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190971.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LEG7, Q9M324
    UniProtKB/TrEMBL
    A0A178VAE8, A0A5S9XKU6
    Conserved Domains (3) summary
    PLN03088
    Location:394 → 487
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    sd00006
    Location:388 → 412
    TPR; TPR repeat [structural motif]
    cl21453
    Location:70 → 307
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M324.1

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