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Plant calmodulin-binding protein-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824622, updated on 18-Sep-2024

Summary

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Official Full Name
Plant calmodulin-binding protein-like protein
Primary source
TAIR:AT3G54570
Locus tag
AT3G54570
See related
Araport:AT3G54570
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (20197949..20199202, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase subunit beta-beta protein, putative (DUF506) Neighboring gene histone H2A 11 Neighboring gene Proline-rich extensin-like family protein Neighboring gene hydroxyproline-rich glycoprotein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_115314.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Plant calmodulin-binding protein-like protein
NP_191020.1
  • Plant calmodulin-binding protein-related; CONTAINS InterPro DOMAIN/s: Calmodulin-binding protein, plant (InterPro:IPR012417); BEST Arabidopsis thaliana protein match is: Plant calmodulin-binding protein-related (TAIR:AT2G38800.1); Has 207 Blast hits to 162 proteins in 51 species: Archae - 0; Bacteria - 22; Metazoa - 7; Fungi - 9; Plants - 118; Viruses - 7; Other Eukaryotes - 44 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    20197949..20199202 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115314.1 → NP_191020.1  Plant calmodulin-binding protein-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191020.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VMY9, A0A654FHX3, Q9M1H1
    Conserved Domains (1) summary
    smart01054
    Location:297 → 416
    CaM_binding; Plant calmodulin-binding domain
Nucleotide Protein
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