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downstream neighbor of Son [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824640, updated on 18-Sep-2024

Summary

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Official Full Name
downstream neighbor of Son
Primary source
TAIR:AT3G54750
Locus tag
AT3G54750
See related
Araport:AT3G54750
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
15
Sequence:
Chromosome: 3; NC_003074.8 (20264634..20268885, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Peptidase M28 family protein Neighboring gene transcription repressor Neighboring gene zein-binding protein (Protein of unknown function, DUF593) Neighboring gene dentin sialophosphoprotein-like protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_001203164.2
NM_001339694.1
NM_001339695.1
NM_115332.3
NM_180372.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
downstream neighbor of Son
NP_001190093.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages.
NP_191035.2
  • unknown protein; Has 145 Blast hits to 145 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
NP_850703.1
  • unknown protein; Has 145 Blast hits to 145 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    20264634..20268885 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203164.2 → NP_001190093.1  downstream neighbor of Son [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190093.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2EXE9, F4JE17

  2. NM_180372.4 → NP_850703.1  downstream neighbor of Son [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850703.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2EU31, Q8GXI8

  3. NM_001339695.1 → NP_001327038.1  downstream neighbor of Son [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2EXE9, F4JE17

  4. NM_001339694.1 → NP_001327039.1  downstream neighbor of Son [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LR33, A0A7G2EV58

  5. NM_115332.3 → NP_191035.2  downstream neighbor of Son [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191035.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2EU31, Q8GXI8
Nucleotide Protein
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