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CYP94D2 cytochrome P450, family 94, subfamily D, polypeptide 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824830, updated on 18-Sep-2024

Summary

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Official Symbol
CYP94D2
Official Full Name
cytochrome P450, family 94, subfamily D, polypeptide 2
Primary source
TAIR:AT3G56630
Locus tag
AT3G56630
See related
Araport:AT3G56630
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
''cytochrome P450; cytochrome P450; family 94; polypeptide 2; polypeptide 2''; subfamily D
Summary
member of CYP94D
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Genomic context

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See CYP94D2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (20978901..20980772)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene prolamin-like protein Neighboring gene nodulin MtN21 /EamA-like transporter family protein Neighboring gene exocyst complex component sec15A Neighboring gene thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) Neighboring gene basic region/leucine zipper motif protein 49

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_115522.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 

General protein information

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Preferred Names
cytochrome P450, family 94, subfamily D, polypeptide 2
NP_191222.1
  • ''cytochrome P450, family 94, subfamily D, polypeptide 2'' (CYP94D2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily D, polypeptide 1 (TAIR:AT1G34540.1); Has 28588 Blast hits to 28499 proteins in 1478 species: Archae - 44; Bacteria - 2617; Metazoa - 10641; Fungi - 6172; Plants - 8084; Viruses - 3; Other Eukaryotes - 1027 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    20978901..20980772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115522.4 → NP_191222.1  cytochrome P450, family 94, subfamily D, polypeptide 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191222.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V9L2, A0A384LI94, A0A5S9XLF0, A0A654FHB0, Q9LXX7
    Conserved Domains (1) summary
    cd11064
    Location:64 → 491
    CYP86A; cytochrome P450 family 86, subfamily A
Nucleotide Protein
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