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F-box associated ubiquitination effector family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824856, updated on 18-Sep-2024

Summary

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Official Full Name
F-box associated ubiquitination effector family protein
Primary source
TAIR:AT3G56890
Locus tag
AT3G56890
See related
Araport:AT3G56890
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (21062800..21063717, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene VQ motif-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene plastid-specific 50S ribosomal protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
F-box associated ubiquitination effector family protein
NP_191248.1
  • F-box associated ubiquitination effector family protein; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G57580.1); Has 494 Blast hits to 482 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 494; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    21062800..21063717 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115548.2 → NP_191248.1  F-box associated ubiquitination effector family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191248.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V731, Q9LER9
    Conserved Domains (1) summary
    pfam08268
    Location:41 → 144
    FBA_3; F-box associated domain
Nucleotide Protein
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