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MICPUN_87938 hypothetical protein [ Micromonas commoda ]

Gene ID: 8248580, updated on 16-Nov-2023

Summary

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Gene symbol
MICPUN_87938
Gene description
hypothetical protein
Locus tag
MICPUN_87938
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Micromonas commoda (strain: RCC299)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
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Genomic context

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See MICPUN_87938 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
1
Sequence:
Chromosome: 13; NC_013050.1 (111465..112328)

Chromosome 13 - NC_013050.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene major facilitator superfamily

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013050.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Worden AZ, et al. Science, 2009 Apr 10. PMID 19359590
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carboxylic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013050.1 Reference assembly

    Range
    111465..112328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002505351.1 → XP_002505397.1  predicted protein [Micromonas commoda]

    See identical proteins and their annotated locations for XP_002505397.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C1EFT7
    Conserved Domains (1) summary
    PLN02845
    Location:1 → 287
    PLN02845; Branched-chain-amino-acid aminotransferase-like protein
Nucleotide Protein
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Gene LinkOut

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