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phospholipase-like protein (PEARLI 4) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824999, updated on 18-Sep-2024

Summary

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Official Full Name
phospholipase-like protein (PEARLI 4) family protein
Primary source
TAIR:AT3G58300
Locus tag
AT3G58300
See related
Araport:AT3G58300
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (21582764..21583390, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene MATH domain/coiled-coil protein Neighboring gene TRAF-like superfamily protein Neighboring gene cysteine-rich repeat secretory protein, putative (DUF26) Neighboring gene Ubiquitin-specific protease family C19-related protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_115692.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
phospholipase-like protein (PEARLI 4) family protein
NP_191389.1
  • Arabidopsis phospholipase-like protein (PEARLI 4) family; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT3G58330.1); Has 344 Blast hits to 320 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0; Plants - 324; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    21582764..21583390 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115692.1 → NP_191389.1  phospholipase-like protein (PEARLI 4) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191389.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VGE3, A0A384KAZ4, A0A7G2ESF2, Q9M2I6
    Conserved Domains (1) summary
    pfam05278
    Location:3 → 149
    PEARLI-4; Arabidopsis phospholipase-like protein (PEARLI 4)
Nucleotide Protein
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