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TRM7 GPI-anchored adhesin-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825034, updated on 18-Sep-2024

Summary

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Official Symbol
TRM7
Official Full Name
GPI-anchored adhesin-like protein
Primary source
TAIR:AT3G58650
Locus tag
AT3G58650
See related
Araport:AT3G58650
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
TON1 Recruiting Motif 7
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Genomic context

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See TRM7 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Sequence:
Chromosome: 3; NC_003074.8 (21696072..21699998, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene sequence-specific DNA binding transcription factor Neighboring gene Mitogen activated protein kinase kinase kinase-like protein Neighboring gene Ribosomal protein L1p/L10e family Neighboring gene 2-aminoethanethiol dioxygenase, putative (DUF1637)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The preprophase band of microtubules controls the robustness of division orientation in plants. Schaefer E, et al. Science, 2017 Apr 14. PMID 28408602
  2. Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Nühse TS, et al. Mol Cell Proteomics, 2003 Nov. PMID 14506206
  3. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_115727.7

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within establishment of mitotic spindle orientation IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within preprophase band assembly IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane HDA PubMed 
located_in preprophase band IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
GPI-anchored adhesin-like protein
NP_191424.5
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26910.1); Has 2350 Blast hits to 1412 proteins in 248 species: Archae - 0; Bacteria - 487; Metazoa - 577; Fungi - 236; Plants - 184; Viruses - 4; Other Eukaryotes - 862 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    21696072..21699998 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115727.7 → NP_191424.5  GPI-anchored adhesin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191424.5

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V740, A0A384KX90, A0A5S9XM03, Q9M2F2
    Conserved Domains (2) summary
    pfam14309
    Location:654 → 804
    DUF4378; Domain of unknown function (DUF4378)
    pfam14383
    Location:79 → 104
    VARLMGL; DUF761-associated sequence motif
Nucleotide Protein
Heading Accession and Version

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