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F-box/associated interaction domain protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825411, updated on 18-Sep-2024

Summary

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Official Full Name
F-box/associated interaction domain protein
Primary source
TAIR:AT3G62380
Locus tag
AT3G62380
See related
Araport:AT3G62380
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (23083523..23085035, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene WRKY family transcription factor Neighboring gene F-box/associated interaction domain protein Neighboring gene Carbohydrate-binding-like fold Neighboring gene heme binding protein Neighboring gene TRICHOME BIREFRINGENCE-LIKE 6 Neighboring gene cytochrome C oxidase subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_116103.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
F-box/associated interaction domain protein
NP_191797.1
  • CONTAINS InterPro DOMAIN/s: F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G71320.1); Has 422 Blast hits to 419 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    23083523..23085035 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116103.3 → NP_191797.1  F-box/associated interaction domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191797.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VE76, Q9LZQ2
    Conserved Domains (1) summary
    TIGR01640
    Location:75 → 270
    F_box_assoc_1; F-box protein interaction domain
Nucleotide Protein
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