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ATOEP16-4 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825463, updated on 18-Sep-2024

Summary

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Official Symbol
ATOEP16-4
Official Full Name
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Primary source
TAIR:AT3G62880
Locus tag
AT3G62880
See related
Araport:AT3G62880
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Summary
Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family.
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Genomic context

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See ATOEP16-4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Sequence:
Chromosome: 3; NC_003074.8 (23244614..23246066, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene CW-type Zinc Finger

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The outer plastid envelope protein Oep16: role as precursor translocase in import of protochlorophyllide oxidoreductase A. Reinbothe S, et al. Proc Natl Acad Sci U S A, 2004 Feb 17. PMID 14769929, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Markers

  • At3g62890_Arabidopsis_lyrata_ssp._lyrata_CAN1 (e-PCR)
  • At3g62890_Arabidopsis_lyrata_ssp._petraea_GER1 (e-PCR)

Homology

NM_001340181.1
NM_116153.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein homodimerization activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in protein insertion into mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of TIM22 mitochondrial import inner membrane insertion complex IEA
Inferred from Electronic Annotation
more info
  
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in plastid outer membrane ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
NP_001319822.1
  • ATOEP16-4; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: plastid outer membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_191847.1
  • ATOEP16-4; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: plastid outer membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 198 Blast hits to 198 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    23244614..23246066 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116153.5 → NP_191847.1  Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191847.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LZH8
    UniProtKB/TrEMBL
    A0A178VCJ7, A0A5S9XN98
    Conserved Domains (1) summary
    pfam02466
    Location:11 → 90
    Tim17; Tim17/Tim22/Tim23/Pmp24 family

  2. NM_001340181.1 → NP_001319822.1  Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A2H1ZEK9
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LZH8.1

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