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F-box protein with a domain protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825778, updated on 18-Sep-2024

Summary

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Official Full Name
F-box protein with a domain protein
Primary source
TAIR:AT4G04480
Locus tag
AT4G04480
See related
Araport:AT4G04480
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T26N6.8; T26N6_8
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (2229649..2230851)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene WRKY family transcription factor Neighboring gene Saposin-like aspartyl protease family protein Neighboring gene Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 36 Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_116686.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
F-box protein with a domain protein
NP_192357.1
  • unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has 78 Blast hits to 78 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    2229649..2230851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116686.2 → NP_192357.1  F-box protein with a domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192357.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0MF53, Q9XEC5
    Conserved Domains (1) summary
    pfam14476
    Location:72 → 377
    Chloroplast_duf; Petal formation-expressed
Nucleotide Protein
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