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pfkB-like carbohydrate kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826617, updated on 18-Sep-2024

Summary

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Official Full Name
pfkB-like carbohydrate kinase family protein
Primary source
TAIR:AT4G10260
Locus tag
AT4G10260
See related
Araport:AT4G10260
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T9A4.3
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (6371377..6372789, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene B-box zinc finger family protein Neighboring gene HSP20-like chaperones superfamily protein Neighboring gene Wound-responsive family protein Neighboring gene ncRNA Neighboring gene Wound-responsive family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and biochemical characterization of the fructokinase gene family in Arabidopsis thaliana. Riggs JW, et al. BMC Plant Biol, 2017 Apr 26. PMID 28441933, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

NM_117094.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables fructokinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within fructose metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in starch biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
pfkB-like carbohydrate kinase family protein
NP_192764.1
  • pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, sepal, male gametophyte, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT3G59480.1); Has 19547 Blast hits to 19543 proteins in 2443 species: Archae - 410; Bacteria - 14542; Metazoa - 141; Fungi - 136; Plants - 489; Viruses - 0; Other Eukaryotes - 3829 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    6371377..6372789 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117094.3 → NP_192764.1  pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192764.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0MF62, O82616
    UniProtKB/TrEMBL
    A0A178UWC8, A0A5S9XRM5
    Conserved Domains (1) summary
    PLN02323
    Location:1 → 324
    PLN02323; probable fructokinase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O82616.1

Gene LinkOut

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