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LOC8266668 acyl carrier protein 1, mitochondrial [ Ricinus communis (castor bean) ]

Gene ID: 8266668, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8266668
Gene description
acyl carrier protein 1, mitochondrial
Locus tag
RCOM_0658830
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8266668 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 1 NC_063256.1 (168842..171056)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994506.1 (178295..180652, complement)

Chromosome 1 - NC_063256.1Genomic Context describing neighboring genes Neighboring gene probable purine permease 11 Neighboring gene ras-related protein RABH1b Neighboring gene putative invertase inhibitor Neighboring gene protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables acyl carrier activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl carrier protein 1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063256.1 Reference ASM1957865v1

    Range
    168842..171056
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002526457.4 → XP_002526503.1  acyl carrier protein 1, mitochondrial

    See identical proteins and their annotated locations for XP_002526503.1

    UniProtKB/TrEMBL
    B9SKH3
    Conserved Domains (1) summary
    cl09936
    Location:34 → 114
    PP-binding; Phosphopantetheine attachment site
Nucleotide Protein
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