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XBAT34 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827080, updated on 18-Sep-2024

Summary

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Official Symbol
XBAT34
Official Full Name
uncharacterized protein
Primary source
TAIR:AT4G14365
Locus tag
AT4G14365
See related
Araport:AT4G14365
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
XB3 ortholog 4 in Arabidopsis thaliana
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Genomic context

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See XBAT34 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Sequence:
Chromosome: 4; NC_003075.7 (8271270..8273903, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene high affinity nitrate transporter Neighboring gene Regulator of chromosome condensation (RCC1) family protein Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_117514.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_567428.1
  • XB3 ortholog 4 in Arabidopsis thaliana (XBAT34); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 5 in Arabidopsis thaliana (TAIR:AT3G23280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    8271270..8273903 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117514.4 → NP_567428.1  uncharacterized protein AT4G14365 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567428.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LAN6, Q9FPH0
    UniProtKB/TrEMBL
    A0A178V149
    Conserved Domains (4) summary
    cd00204
    Location:17 → 130
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:13 → 108
    Ank_2; Ankyrin repeats (3 copies)
    pfam13920
    Location:321 → 370
    zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)
    sd00045
    Location:41 → 73
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FPH0.1

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