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Survival protein SurE-like phosphatase/nucleotidase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827151, updated on 18-Sep-2024

Summary

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Official Full Name
Survival protein SurE-like phosphatase/nucleotidase
Primary source
TAIR:AT4G14930
Locus tag
AT4G14930
See related
Araport:AT4G14930
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DL3505W; FCAALL.200
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Genomic context

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Location:
chromosome: 4
Exon count:
8
Sequence:
Chromosome: 4; NC_003075.7 (8538586..8541899)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene HISTIDINE BIOSYNTHESIS 5B Neighboring gene Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein Neighboring gene ncRNA Neighboring gene amine oxidase 1 Neighboring gene SNARE associated Golgi protein family Neighboring gene Tubulin/FtsZ family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

NM_117579.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables nucleotidase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 

General protein information

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Preferred Names
Survival protein SurE-like phosphatase/nucleotidase
NP_567449.1
  • Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT1G72880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    8538586..8541899
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001340978.1 → NP_001328377.1  Survival protein SurE-like phosphatase/nucleotidase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UZF8, A0A1P8B4G8, A0A654FPG1

  2. NM_117579.3 → NP_567449.1  Survival protein SurE-like phosphatase/nucleotidase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567449.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UZF8, A0A5S9XSF7, A0A654FPG1, Q8LAM2
    Conserved Domains (1) summary
    pfam01975
    Location:16 → 209
    SurE; Survival protein SurE
Nucleotide Protein
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