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Thioredoxin superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827243, updated on 18-Sep-2024

Summary

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Official Full Name
Thioredoxin superfamily protein
Primary source
TAIR:AT4G15660
Locus tag
AT4G15660
See related
Araport:AT4G15660
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DL3870W; FCAALL.353
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (8925571..8926510)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene adenylyl cyclase Neighboring gene kinase-like protein Neighboring gene Thioredoxin superfamily protein Neighboring gene Thioredoxin superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Glutaredoxin AtGRXS8 represses transcriptional and developmental responses to nitrate in Arabidopsis thaliana roots. Ehrary A, et al. Plant Direct, 2020 Jun. PMID 32537558, Free PMC Article
  2. Nitrate-Regulated Glutaredoxins Control Arabidopsis Primary Root Growth. Patterson K, et al. Plant Physiol, 2016 Feb. PMID 26662603, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_117657.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within response to nitrate IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Thioredoxin superfamily protein
NP_193301.1
  • Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Glutaredoxin (InterPro:IPR002109), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G15670.1); Has 1520 Blast hits to 1515 proteins in 222 species: Archae - 0; Bacteria - 20; Metazoa - 424; Fungi - 241; Plants - 751; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    8925571..8926510
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117657.3 → NP_193301.1  Thioredoxin superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193301.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C1JGQ6, O23417
    UniProtKB/TrEMBL
    A0A178UV83, A0A5S9XSY9
    Conserved Domains (1) summary
    TIGR02189
    Location:4 → 102
    GlrX-like_plant; Glutaredoxin-like family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O23417.1

Gene LinkOut

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