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disease resistance protein (TIR-NBS-LRR class) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827404, updated on 18-Sep-2024

Summary

Official Full Name
disease resistance protein (TIR-NBS-LRR class)
Primary source
TAIR:AT4G16960
Locus tag
AT4G16960
See related
Araport:AT4G16960
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DL4510C; FCAALL.317
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Genomic context

Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (9547402..9551028, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family Neighboring gene SUPPRESSOR OF, CONSTITUTIVE protein Neighboring gene Protein kinase superfamily protein Neighboring gene arabinogalactan-protein family Neighboring gene uncharacterized protein Neighboring gene disease resistance protein (TIR-NBS class)

General gene information

NM_001341171.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in defense response IEA
Inferred from Electronic Annotation
more info
 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
disease resistance protein (TIR-NBS-LRR class)
NP_001319971.1
  • Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT4G16940.1); Has 19980 Blast hits to 13439 proteins in 492 species: Archae - 4; Bacteria - 689; Metazoa - 980; Fungi - 44; Plants - 17549; Viruses - 10; Other Eukaryotes - 704 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    9547402..9551028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001341171.1NP_001319971.1  disease resistance protein (TIR-NBS-LRR class) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4JNB9, O23536