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structural maintenance of chromosomes protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827436, updated on 18-Sep-2024

Summary

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Official Full Name
structural maintenance of chromosomes protein
Primary source
TAIR:AT4G17240
Locus tag
AT4G17240
See related
Araport:AT4G17240
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DL4655C; FCAALL.387
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (9666439..9668507, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Pollen Ole e 1 allergen and extensin family protein Neighboring gene microtubule-associated proteins 70-5 Neighboring gene SCARECROW-like 13 Neighboring gene uncharacterized protein Neighboring gene RING/U-box superfamily protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. bHLH05 is an interaction partner of MYB51 and a novel regulator of glucosinolate biosynthesis in Arabidopsis. Frerigmann H, et al. Plant Physiol, 2014 Sep. PMID 25049362, Free PMC Article
  2. Toward an interaction map of the two-component signaling pathway of Arabidopsis thaliana. Dortay H, et al. J Proteome Res, 2008 Sep. PMID 18642946
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001203819.1
NM_117829.9

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
structural maintenance of chromosomes protein
NP_001190748.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages.
NP_193457.5
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; Has 1142 Blast hits to 1055 proteins in 252 species: Archae - 22; Bacteria - 318; Metazoa - 248; Fungi - 96; Plants - 59; Viruses - 3; Other Eukaryotes - 396 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    9666439..9668507 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117829.9 → NP_193457.5  structural maintenance of chromosomes protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193457.5

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V511, F4JNF8, Q8GYV0
    Conserved Domains (1) summary
    cl27170
    Location:78 → 185
    DUF460; Protein of unknown function (DUF460)

  2. NM_001203819.1 → NP_001190748.1  structural maintenance of chromosomes protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190748.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4JNF7, Q8GYV0
Nucleotide Protein
Heading Accession and Version

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