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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827439, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT4G17250
Locus tag
AT4G17250
See related
Araport:AT4G17250
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DL4660W; FCAALL.204
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (9670763..9673475)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene structural maintenance of chromosomes protein Neighboring gene uncharacterized protein Neighboring gene RING/U-box superfamily protein Neighboring gene Lactate/malate dehydrogenase family protein Neighboring gene Mo25 family protein Neighboring gene Auxin-responsive family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SIS8, a putative mitogen-activated protein kinase kinase kinase, regulates sugar-resistant seedling development in Arabidopsis. Huang Y, et al. Plant J, 2014 Feb. PMID 24320620
  2. Gene expression profiles during heat acclimation in Arabidopsis thaliana suspension-culture cells. Lim CJ, et al. J Plant Res, 2006 Jul. PMID 16807682
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001203820.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within heat acclimation IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_001190749.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: heat acclimation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47580.1).
NP_567526.4
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47580.1); Has 31 Blast hits to 31 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    9670763..9673475
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117831.6 → NP_567526.4  uncharacterized protein AT4G17250 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567526.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V1W3, A0A5S9XTZ1, A0A654FQ57, A0A7G2F088, Q93ZA8

  2. NM_001341197.1 → NP_001328637.1  uncharacterized protein AT4G17250 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V1W3, A0A1P8B5A4, A0A5S9XTZ1

  3. NM_001203820.1 → NP_001190749.1  uncharacterized protein AT4G17250 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190749.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4JNG1, O23568
Nucleotide Protein
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