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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827524, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT4G17990
Locus tag
AT4G17990
See related
Araport:AT4G17990
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T6K21.170; T6K21_170
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (9984386..9985805, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Cys Neighboring gene NAC domain containing protein 71 Neighboring gene myo-inositol polyphosphate 5-phosphatase 2 Neighboring gene CheY-like two-component responsive regulator family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001341250.1
NM_117909.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_193533.5
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17700.1); Has 134 Blast hits to 131 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    9984386..9985805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117909.5 → NP_193533.5  uncharacterized protein AT4G17990 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193533.5

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O49698
    Conserved Domains (1) summary
    cl19902
    Location:9 → 125
    protein_MS5; Protein MS5

  2. NM_001341250.1 → NP_001328528.1  uncharacterized protein AT4G17990 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JQ18, O49698
    UniProtKB/TrEMBL
    A0A178V068, A0A5S9XVH8
    Conserved Domains (1) summary
    cl19902
    Location:9 → 225
    protein_MS5; Protein MS5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O49698.2

Gene LinkOut

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