Translation elongation factor EF1A/initiation factor IF2gamma family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

Go to the top of the page Help

Official Full Name: Translation elongation factor EF1A/initiation factor IF2gamma family protein
Primary source: TAIR:AT4G18330
Locus tag: AT4G18330
See related: Araport:AT4G18330
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: T9A21.180; T9A21_180
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

See in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 7

Sequence:: Chromosome: 4; NC_003075.7 (10126533..10128734)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

Go to the top of the page Help

NM_001341274.1

Supported by ESTs:

NM_202838.1

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables GTPase activity	IEA Inferred from Electronic Annotation more info
enables tRNA binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	ISM Inferred from Sequence Model more info

General protein information

Go to the top of the page Help

Preferred Names: Translation elongation factor EF1A/initiation factor IF2gamma family protein

NP_001319983.1

Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, GTPase activity, translation initiation factor activity; INVOLVED IN: translational initiation; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 gamma subunit (TAIR:AT1G04170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NP_974567.1

Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, GTPase activity, translation initiation factor activity; INVOLVED IN: translational initiation; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 gamma subunit (TAIR:AT1G04170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

10126533..10128734

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001341274.1 → NP_001319983.1 Translation elongation factor EF1A/initiation factor IF2gamma family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

F4JQU2
NM_202838.1 → NP_974567.1 Translation elongation factor EF1A/initiation factor IF2gamma family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_974567.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V2V9, F4JQU1

Conserved Domains (4) summary

cd01888
Location:40 → 247

eIF2_gamma; Gamma subunit of initiation factor 2 (eIF2 gamma)

PTZ00327
Location:6 → 464

PTZ00327; eukaryotic translation initiation factor 2 gamma subunit; Provisional

cd03688
Location:248 → 361

eIF2_gamma_II; Domain II of the gamma subunit of eukaryotic translation initiation factor 2

cd15490
Location:364 → 458

eIF2_gamma_III; Domain III of eukaryotic initiation factor eIF2 gamma