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LOC8279152 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 [ Ricinus communis (castor bean) ]

Gene ID: 8279152, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8279152
Gene description
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1
Locus tag
RCOM_0534850
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8279152 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 5 NC_063260.1 (413641..416914, complement)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994383.1 (264332..267492)

Chromosome 5 - NC_063260.1Genomic Context describing neighboring genes Neighboring gene heavy metal-associated isoprenylated plant protein 43-like Neighboring gene toMV susceptible protein tm-1(GCR26) Neighboring gene abscisic acid 8'-hydroxylase 2 Neighboring gene AAA-ATPase At3g50940

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oligosaccharyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063260.1 Reference ASM1957865v1

    Range
    413641..416914 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002521492.4 → XP_002521538.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1

    See identical proteins and their annotated locations for XP_002521538.1

    UniProtKB/TrEMBL
    B9RZ19, B9S6B9
    Conserved Domains (1) summary
    pfam02109
    Location:10 → 115
    DAD; DAD family

  2. XM_015720763.3 → XP_015576249.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1

    UniProtKB/TrEMBL
    B9RZ19, B9S6B9
    Conserved Domains (1) summary
    pfam02109
    Location:10 → 115
    DAD; DAD family
Nucleotide Protein
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