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G-type lectin S-receptor-like Serine/Threonine-kinase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828018, updated on 18-Sep-2024

Summary

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Official Full Name
G-type lectin S-receptor-like Serine/Threonine-kinase
Primary source
TAIR:AT4G03230
Locus tag
AT4G03230
See related
Araport:AT4G03230
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F4C21.16; F4C21_16
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Genomic context

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Location:
chromosome: 4
Exon count:
10
Sequence:
Chromosome: 4; NC_003075.7 (1418841..1423337, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Coproporphyrinogen III oxidase Neighboring gene xyloglucan endotransglucosylase/hydrolase 9 Neighboring gene Protein with RNI-like/FBD-like domain Neighboring gene Homeodomain-like superfamily protein Neighboring gene frataxin-like protein Neighboring gene Outer arm dynein light chain 1 protein Neighboring gene Cyclin D6;1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Independent S-locus mutations caused self-fertility in Arabidopsis thaliana. Boggs NA, et al. PLoS Genet, 2009 Mar. PMID 19300485, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_001340438.1
NM_001340439.1
NM_001340440.1
NM_116561.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calmodulin binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in recognition of pollen IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
G-type lectin S-receptor-like Serine/Threonine-kinase
NP_192232.5
  • S-locus lectin protein kinase family protein; FUNCTIONS IN: sugar binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1); Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89; Bacteria - 13334; Metazoa - 43594; Fungi - 9240; Plants - 36995; Viruses - 386; Other Eukaryotes - 17309 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    1418841..1423337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001340435.1 → NP_001329566.1  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V611, A0A1P8B837

  2. NM_001340434.1 → NP_001329567.1  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V611, A0A1P8B844

  3. NM_001340437.1 → NP_001329570.1  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V611, A0A1P8B840

  4. NM_001340436.1 → NP_001329571.1  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V611, A0A1P8B838
    Conserved Domains (5) summary
    cd01098
    Location:339 → 425
    PAN_AP_plant; Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and ...
    cd14066
    Location:696 → 961
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam00954
    Location:210 → 319
    S_locus_glycop; S-locus glycoprotein domain
    pfam01453
    Location:79 → 178
    B_lectin; D-mannose binding lectin
    pfam11883
    Location:964 → 1010
    DUF3403; Domain of unknown function (DUF3403)

  5. NM_116561.6 → NP_192232.5  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192232.5

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V611, A0A1P8B838
    Conserved Domains (5) summary
    cd01098
    Location:339 → 425
    PAN_AP_plant; Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and ...
    cd14066
    Location:696 → 961
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam00954
    Location:210 → 319
    S_locus_glycop; S-locus glycoprotein domain
    pfam01453
    Location:79 → 178
    B_lectin; D-mannose binding lectin
    pfam11883
    Location:964 → 1010
    DUF3403; Domain of unknown function (DUF3403)

  6. NM_001340438.1 → NP_001329569.1  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V611, A0A1P8B844

  7. NM_001340439.1 → NP_001329568.1  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V611, A0A1P8B859

  8. NM_001340440.1 → NP_001329572.1  G-type lectin S-receptor-like Serine/Threonine-kinase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JI70, Q9ZR08
    UniProtKB/TrEMBL
    A0A178V611
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZR08.3

Gene LinkOut

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