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ULP1B UB-like protease 1B [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828036, updated on 18-Sep-2024

Summary

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Official Symbol
ULP1B
Official Full Name
UB-like protease 1B
Primary source
TAIR:AT4G00690
Locus tag
AT4G00690
See related
Araport:AT4G00690
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F6N23.7; F6N23_7; UB-like protease 1B
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Genomic context

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See ULP1B in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Sequence:
Chromosome: 4; NC_003075.7 (281132..283612)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene RNAhelicase-like 8 Neighboring gene Remorin family protein Neighboring gene actin depolymerizing factor 8 Neighboring gene ncRNA Neighboring gene Spc97/Spc98 family of spindle pole body (SBP) component Neighboring gene C2 calcium/lipid-binding plant phosphoribosyltransferase family protein Neighboring gene BR-signaling kinase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_001340261.1

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
UB-like protease 1B
NP_001319834.1
  • UB-like protease 1B (ULP1B); FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G15880.1); Has 1373 Blast hits to 1372 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 603; Fungi - 267; Plants - 349; Viruses - 5; Other Eukaryotes - 149 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    281132..283612
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001340261.1 → NP_001319834.1  UB-like protease 1B [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JHF6, O65278
    UniProtKB/TrEMBL
    A0A5S9XNN2, A0A654FKM6
    Conserved Domains (1) summary
    cl23802
    Location:105 → 341
    Peptidase_C48; Ulp1 protease family, C-terminal catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O65278.2

Gene LinkOut

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