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MEE49 Ribosomal RNA processing Brix domain protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828136, updated on 18-Sep-2024

Summary

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Official Symbol
MEE49
Official Full Name
Ribosomal RNA processing Brix domain protein
Primary source
TAIR:AT4G01560
Locus tag
AT4G01560
See related
Araport:AT4G01560
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F11O4.6; F11O4_6; maternal effect embryo arrest 49
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Genomic context

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See MEE49 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Sequence:
Chromosome: 4; NC_003075.7 (676982..679276, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene NAC with transmembrane motif1 Neighboring gene NAC domain containing protein 69 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene serine protease inhibitor, Kazal-type family protein Neighboring gene ncRNA Neighboring gene AP2/B3-like transcriptional factor family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis. Pagnussat GC, et al. Development, 2005 Feb. PMID 15634699
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_116386.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables rRNA primary transcript binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within embryo development ending in seed dormancy IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Ribosomal RNA processing Brix domain protein
NP_567213.1
  • maternal effect embryo arrest 49 (MEE49); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT1G63780.1); Has 893 Blast hits to 882 proteins in 227 species: Archae - 2; Bacteria - 0; Metazoa - 265; Fungi - 337; Plants - 121; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    676982..679276 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116386.4 → NP_567213.1  Ribosomal RNA processing Brix domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567213.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V1M1, Q9M125
    Conserved Domains (1) summary
    smart00879
    Location:130 → 309
    Brix; The Brix domain is found in a number of eukaryotic proteins
Nucleotide Protein
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