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HSP20-like chaperones superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828276, updated on 18-Sep-2024

Summary

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Official Full Name
HSP20-like chaperones superfamily protein
Primary source
TAIR:AT4G21870
Locus tag
AT4G21870
See related
Araport:AT4G21870
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T8O5.80; T8O5_80
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (11603481..11604637, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene methionine sulfoxide reductase B9 Neighboring gene methionine sulfoxide reductase B 2 Neighboring gene uncharacterized protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene zinc finger MYND domain protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_118308.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
HSP20-like chaperones superfamily protein
NP_193918.1
  • HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 2331 Blast hits to 2331 proteins in 523 species: Archae - 47; Bacteria - 802; Metazoa - 2; Fungi - 44; Plants - 1239; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    11603481..11604637 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118308.4 → NP_193918.1  HSP20-like chaperones superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193918.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O49710, Q8GY90
    UniProtKB/TrEMBL
    A0A178UUY5, A0A5S9XUQ1, A0A7G2EZN0
    Conserved Domains (1) summary
    cl00175
    Location:27 → 110
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O49710.1

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