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pesticidal crystal cry8Ba protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828563, updated on 18-Sep-2024

Summary

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Official Full Name
pesticidal crystal cry8Ba protein
Primary source
TAIR:AT4G24610
Locus tag
AT4G24610
See related
Araport:AT4G24610
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22K18.190; F22K18_190
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Genomic context

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Location:
chromosome: 4
Exon count:
21
Sequence:
Chromosome: 4; NC_003075.7 (12700317..12708424, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Rho GTPase activation protein (RhoGAP) with PH domain-containing protein Neighboring gene RING finger protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene phosphoglucose isomerase 1 Neighboring gene DHHC-type zinc finger family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_001203896.1
NM_001341687.1
NM_001341688.1
NM_118594.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
pesticidal crystal cry8Ba protein
NP_001190825.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65440.1).
NP_194192.2
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65440.1); Has 820 Blast hits to 264 proteins in 74 species: Archae - 0; Bacteria - 15; Metazoa - 77; Fungi - 83; Plants - 96; Viruses - 0; Other Eukaryotes - 549 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    12700317..12708424 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118594.4 → NP_194192.2  pesticidal crystal cry8Ba protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194192.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FSE3, F4JQZ6

  2. NM_001341687.1 → NP_001329819.1  pesticidal crystal cry8Ba protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B8V7, A0A654FSE3

  3. NM_001341688.1 → NP_001329820.1  pesticidal crystal cry8Ba protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B8Y0, A0A5S9XW67, A0A654FSE3

  4. NM_001203896.1 → NP_001190825.1  pesticidal crystal cry8Ba protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190825.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XW67, A0A654FSE3, F4JQZ7
Nucleotide Protein
Heading Accession and Version

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