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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828597, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT4G24950
Locus tag
AT4G24950
See related
Araport:AT4G24950
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F13M23.90; F13M23_90
Summary
Encodes the plant KASH protein SINE4; SINE4 interacts with SUN1 and SUN2 and is localized at the nuclear envelope.
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (12826282..12826755)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene thylakoid lumenal 17.9 kDa protein, chloroplast Neighboring gene SUMO-activating enzyme 1A Neighboring gene HVA22 homologue D Neighboring gene Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of unique SUN-interacting nuclear envelope proteins with diverse functions in plants. Zhou X, et al. J Cell Biol, 2014 Jun 9. PMID 24891605, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Markers

NM_118627.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in nuclear envelope IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
NP_194225.1
  • unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    12826282..12826755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118627.1 → NP_194225.1  uncharacterized protein AT4G24950 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194225.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SW31
    UniProtKB/TrEMBL
    A0A5S9XXS6, A0A654FSZ2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SW31.1

Gene LinkOut

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