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CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828683, updated on 18-Sep-2024

Summary

Official Full Name
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Primary source
TAIR:AT4G25780
Locus tag
AT4G25780
See related
Araport:AT4G25780
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14M19.60; F14M19_60
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Genomic context

Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (13120824..13122042)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene glutamine dumper 2 Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein Neighboring gene Calmodulin-binding protein

General gene information

NM_118710.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular region ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
NP_194308.1
  • CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT5G57625.1); Has 3029 Blast hits to 2936 proteins in 376 species: Archae - 0; Bacteria - 66; Metazoa - 1646; Fungi - 332; Plants - 881; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13120824..13122042
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118710.4NP_194308.1  CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194308.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V835, A0A5S9XVV6, A0A654FSQ8, Q9SW05
    Conserved Domains (1) summary
    cd05381
    Location:54190
    CAP_PR-1; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain of pathogenesis-related protein 1 (PR-1) family proteins