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VIIIB P-loop containing nucleoside triphosphate hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828845, updated on 18-Sep-2024

Summary

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Official Symbol
VIIIB
Official Full Name
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Primary source
TAIR:AT4G27370
Locus tag
AT4G27370
See related
Araport:AT4G27370
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATVIIIB; F27G19.14; MYOSIN VIII B
Summary
member of Myosin-like proteins
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Genomic context

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See VIIIB in Genome Data Viewer
Location:
chromosome: 4
Exon count:
25
Sequence:
Chromosome: 4; NC_003075.7 (13694689..13701119, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene membrane lipoprotein lipid attachment site-like protein, putative (DUF1223) Neighboring gene Dynein light chain type 1 family protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene tRNA-Phe

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the myosins encoded in the recently completed Arabidopsis thaliana genome sequence. Reddy AS, et al. Genome Biol, 2001. PMID 11516337, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_118871.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables cytoskeletal motor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within actin filament-based movement TAS
Traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
P-loop containing nucleoside triphosphate hydrolases superfamily protein
NP_194467.5
  • VIIIB; FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: chloroplast, myosin complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin 2 (TAIR:AT5G54280.2); Has 7343 Blast hits to 6663 proteins in 755 species: Archae - 3; Bacteria - 49; Metazoa - 4831; Fungi - 770; Plants - 447; Viruses - 2; Other Eukaryotes - 1241 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13694689..13701119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001341848.1 → NP_001328308.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UWA6, A0A1P8B4A4

  2. NM_001341849.1 → NP_001328309.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UWA6, A0A1P8B4A4

  3. NM_001341850.1 → NP_001328307.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B4C4, A0A654FTQ3

  4. NM_118871.6 → NP_194467.5  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194467.5

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JIU4, O81840, Q9M0J7
    UniProtKB/TrEMBL
    A0A654FTQ3
    Conserved Domains (2) summary
    smart00242
    Location:159 → 828
    MYSc; Myosin. Large ATPases
    cd01383
    Location:178 → 818
    MYSc_Myo8; class VIII myosin, motor domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4JIU4.1

Gene LinkOut

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