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Late embryogenesis abundant (LEA) protein-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828848, updated on 18-Sep-2024

Summary

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Official Full Name
Late embryogenesis abundant (LEA) protein-like protein
Primary source
TAIR:AT4G27400
Locus tag
AT4G27400
See related
Araport:AT4G27400
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F27G19.5
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Genomic context

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Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (13705267..13706843)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene tRNA-Phe Neighboring gene NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_118874.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Late embryogenesis abundant (LEA) protein-like protein
NP_194470.1
  • Late embryogenesis abundant (LEA) protein-related; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, root; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Root cap (InterPro:IPR009646); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) protein-related (TAIR:AT5G54370.1); Has 154 Blast hits to 152 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13705267..13706843
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118874.3 → NP_194470.1  Late embryogenesis abundant (LEA) protein-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194470.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V154, A0A5S9XX19, O81843
    Conserved Domains (1) summary
    pfam06830
    Location:249 → 305
    Root_cap; Root cap
Nucleotide Protein
Heading Accession and Version

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