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HSP20-like chaperones superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828902, updated on 18-Sep-2024

Summary

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Official Full Name
HSP20-like chaperones superfamily protein
Primary source
TAIR:AT4G27890
Locus tag
AT4G27890
See related
Araport:AT4G27890
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T27E11.130; T27E11_130
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Genomic context

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Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (13886033..13887272)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Protein with RING/U-box and TRAF-like domain Neighboring gene tRNA-Ala Neighboring gene CCT motif family protein Neighboring gene SET domain protein 16

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_118927.5

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
HSP20-like chaperones superfamily protein
NP_194518.1
  • HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G53400.1); Has 1077 Blast hits to 1040 proteins in 209 species: Archae - 0; Bacteria - 27; Metazoa - 492; Fungi - 104; Plants - 168; Viruses - 0; Other Eukaryotes - 286 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13886033..13887272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118927.5 → NP_194518.1  HSP20-like chaperones superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194518.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9STN7
    UniProtKB/TrEMBL
    A0A178V3H0, A0A5S9XWX5
    Conserved Domains (1) summary
    cd06467
    Location:136 → 220
    p23_NUDC_like; p23_like domain of NUD (nuclear distribution) C and similar proteins. Aspergillus nidulas (An) NUDC is needed for nuclear movement. AnNUDC is localized at the hyphal cortex, and binds NUDF at spindle pole bodies (SPBs) and in the cytoplasm at different ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9STN7.1

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